Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015844588.1_cds_XP_016509056.1_22016
CDS Infomation

[gene=LOC107826583] [db_xref=GeneID:107826583] [protein=uncharacterized protein LOC107826583] [protein_id=XP_016509056.1] [location=join(31334..31433,32855..33257,33796..33973,34056..34195,35690..36563,36753..36853,37047..37191,37272..37340,37437..37482,38506..38957,39104..39183,39860..39995,40928..41108,41470..41552,41637..41759)] [gbkey=CDS]
Sequence

ATGAAGGCCATGGAGACCTTGCAAGATCTGATTGAAGAAGTAAAAGTTCGAACGGTTTGG
TGGGGTTTGTGTATATTTGCTGTCTGTTACTTTTTAACACACACCAGTACATCGATGTGG
ATGAATCTACCTATAGCTGTACTGTTGGTTTTTGGATTACGGATATTGTTTAATGAAGTG
GACTTCCGTTGGAAAGTTCGGAATGTGCGGCCACCAACATACTTGGCACACTTAGAAAAG
AAGCAGCTATCTGTGAATGATAGTCGACTTTCTACCTCACCACCCACACTGAAATGGAAG
AGGAAAATTGGTTCTCCACTTGTAGAGGCAGCAGCAGAGGGGTTCATTGACAAGGTTTTG
CATGATTTTGTGATTGATTTGTGGTACTCGGATATTACACCTGACAGGGAGGCACCAGAG
CTGATACATGAAATAATCATGGATGTCCTTGGTGAAATATCTGGAAGAGTGAAAGGAATT
AACCTTGTAGAACTGTTGACAAGGGATGTGGTGGACCTGATAGGAGATCACCTAGACCTT
TTCCGCAGGAACCAGACAGCTATTGGCGTGGATGTCATGGGTACATTGTCTTCGGAAGAA
AGGGATGAAAGATTGAAGCACCATCTGTTGGCCTCTAAAGAACTTCACCCTGCTTTGATA
TCAGCTGAGAGTGAGTACAAGGTACTTCAACGGCTCATTGGTGGAATCTTAGCTGTTGTG
CTAAGACCCAGGGAAGCACAAAGCCCCTTAGTTCGGTGTATTGCCAGAGAACTATTAACT
TCTTTAGTGGTACAGCCTCTTCTGAATCTTGCAAGCCCCGGGTATATTAATGAATTGATT
GAATACATTTTCCTTGCATATAATGATGAGGGGTGTAAGCAGTCCGGCGATGGTAAATCG
ACTAAAGCAGAAAGCCACAATCGCAATCAGGGTGCTTCCTCAGACACTGTAAAATGTTCA
GAAACTGATTATAAACAGAAAGAACCTACCAAGAATCAAGGGACTGATGCCTCGATCTGC
CAATATGACCATCGAAGAGAGCAATCATCAGCTAATGCAGGAAGTTCAATTTCTAGTTCG
ATTCAAGATGAGGCTAATCATCCAAGGCCTGCTGACTGGGCTCGTGTCCTTGAAGCAGCT
ACCCAGAGAAGAACAGAAGTTCTGATGCCTGAAAATCTTGAAAACATGTGGGCAATCGGC
AGAAACTATAAGAAAAAAATCCAAAAGTATTCTGCCTCGGGAGGAATTCAGGCTCCTGGA
GTAAAGGTTACTGTAAGCAGTGGAAAAGATGAGGGGAAAGAATTACCAACTCAGAAGTCT
GAGGTAGTCATGAAAATGGTAGATAAACAACACGATCCAAATCAACCACATAATCAGAGA
AGTCATGCCCTGCATTTGTCTCAAGAGCTAAAAAAGGAAGTGCCATCCAAGGGAGGAATT
TCCTATGATGTTGACAATGCTTCTGCCATTGTTGCATATGAGACTAAGACTAGGCTGAAG
AGATCAAATAGTACATCTGATTTAGTTATCCAATCAAATACTGAAGATTTGCTTATGAGC
AAAGGTGGTGGATCCATTATATCAGAATTCTATAGTGCAGAATATAGGAGAAACAATGCA
GTACCCAGCACTATGAGTGCTTCAGACATGGTGATTCGTGGTGAGGGACATCATCGTCCA
AAGCTGAAGTGCAGGGTTTTGGGTGCATATTTTGAGAAGCTGGCCTCAAAATCTTTTGCT
GTATATTCCATTGCGGTTACTGATGCCAATAATAACACTTGGTTCGTAAAGAGAAGATAC
AGGAACTTCGAGAGATTGCATAGACACCTGAAGGATATTCCTAATTACACATTACATTTG
CCTCCTAAGAGGATATTTTCATCGAGTACAGAAGATGCATTCGTTCATCATCGTTGCATT
CAGCTTGACAAATATCTGCAAGATCTCTTGTCAATTGCCAATGTGGCTGAGCAACATGAA
GTGTGGGATTTTCTCAGTGCCTCTTCCAAGAACTACTCCTTTGGAAAATCTTCTTCAGTG
ATGAGAACACTGGCAGTTAACGTGGATGATGCTGTGGATGATATTGTGCGTCAATTCAAA
GGCGTTTCTGATGGTTTGATGCGTAAAGTTGTTGGCTCTCCTTCATCTTCTTCTTATGAA
CCTACTACCTCTACTTCAGACAGAAATTTGTCCTGGAATGTGGAGGAAATGAATAAACTG
GCTTTAACACAAAGTACCTCCGAGTCACTTAATAGCTTTTCTGACAATGATGATGGTGAT
AAGGATGGAAGCCACGGGCAGGAGGAAGTAGGACCTAGTTCAGAAGCTAATGGGTGGCAT
TCGGACAATGAGTTGAATTCAAAAGGATTCCCCCCTCGGGTGGTTAAATGTAACGAAGAG
CTGAGAAGCTCAGCGGCTGACTCGAAGTACGGTTCTGGAGGATTTCCAGACACAAGTTTG
GCAGTAGTTCCCAGTCAACAAGAGGATCCAGCTGGAGTGCCACCAGAGTGGACACCGCCC
AATTTAAGTGTACCTATCTTGAATTTGGTGGACAAGATTTTTCAGCTGAATAGAAGAGGC
TGGCTAAGAAGACAAGTATTTTGGATATCAAAGGAAATAATGCAGTTAATGATGGAGGAC
GCTATTGATGATTGGCTGTTAAGGCAAATCCATTGGCTACGGAGAGAGGATGTTATTGCT
CAGGGAATCGGATGGATTAAAGATGTTCTCTGGCCGAATGGCATTTTCTTCATAAAATTA
AGAAATCCAGTTGAAATCAACAATCGCGAACCAAATCAAGGAACCACGAGACAACCTGTA
GGAAGTAAGGCCTCTAAGGCAGGATCTTTTGAGGAACAGCTTGAGGCTACTCGTAGAGCA
AGTGATGTGAAAAAGATGCTCTATGATGGTGCTCCCGCCACATTGGTCAGCTTAATTGGG
CACAAGCAGTACAGACGTTGTGCTAGAGATTTGTATTATTTCCTTCAGTCTTCCATCTGT
TTAAAGCAGCTTACATATGGTGTCCTCGAACTTGTACTCATATCGGTCTTCCCTGAGCTG
AGGGATGTTGTGAAGGATATCCATGAAAAGGCACAAGCTCAACCTGTATAG

Peptide Sequence

PEP ID

XP_016509056.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107826583 [Nicotiana tabacum]
Sequence

MKAMETLQDLIEEVKVRTVWWGLCIFAVCYFLTHTSTSMWMNLPIAVLLVFGLRILFNEV
DFRWKVRNVRPPTYLAHLEKKQLSVNDSRLSTSPPTLKWKRKIGSPLVEAAAEGFIDKVL
HDFVIDLWYSDITPDREAPELIHEIIMDVLGEISGRVKGINLVELLTRDVVDLIGDHLDL
FRRNQTAIGVDVMGTLSSEERDERLKHHLLASKELHPALISAESEYKVLQRLIGGILAVV
LRPREAQSPLVRCIARELLTSLVVQPLLNLASPGYINELIEYIFLAYNDEGCKQSGDGKS
TKAESHNRNQGASSDTVKCSETDYKQKEPTKNQGTDASICQYDHRREQSSANAGSSISSS
IQDEANHPRPADWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKIQKYSASGGIQAPG
VKVTVSSGKDEGKELPTQKSEVVMKMVDKQHDPNQPHNQRSHALHLSQELKKEVPSKGGI
SYDVDNASAIVAYETKTRLKRSNSTSDLVIQSNTEDLLMSKGGGSIISEFYSAEYRRNNA
VPSTMSASDMVIRGEGHHRPKLKCRVLGAYFEKLASKSFAVYSIAVTDANNNTWFVKRRY
RNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHHRCIQLDKYLQDLLSIANVAEQHE
VWDFLSASSKNYSFGKSSSVMRTLAVNVDDAVDDIVRQFKGVSDGLMRKVVGSPSSSSYE
PTTSTSDRNLSWNVEEMNKLALTQSTSESLNSFSDNDDGDKDGSHGQEEVGPSSEANGWH
SDNELNSKGFPPRVVKCNEELRSSAADSKYGSGGFPDTSLAVVPSQQEDPAGVPPEWTPP
NLSVPILNLVDKIFQLNRRGWLRRQVFWISKEIMQLMMEDAIDDWLLRQIHWLRREDVIA
QGIGWIKDVLWPNGIFFIKLRNPVEINNREPNQGTTRQPVGSKASKAGSFEEQLEATRRA
SDVKKMLYDGAPATLVSLIGHKQYRRCARDLYYFLQSSICLKQLTYGVLELVLISVFPEL
RDVVKDIHEKAQAQPV

Transcript Sequence

Gene sequence data has not been registered.